LOC111577153 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC111577153

Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (208 aa)

Predicted Functional Partners:

fam120b

0.635

cunh19orf54

0.575

exoc2

0.548

uspl1

0.505

ENSAOCP00000008854

0.462

LOC111574514

0.447

LOC111574506

0.447

LOC111570771

0.435

LOC111587400

0.430

LOC111580650

0.417

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000008854	LOC111577153	ENSAOCP00000008854	ENSAOCP00000001623	TYR_PHOSPHATASE_2 domain-containing protein.	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.462
LOC111570771	LOC111574506	ENSAOCP00000032230	ENSAOCP00000027004	Survival of motor neuron 1, telomeric.	Peptidase M60 domain-containing protein.	0.515
LOC111570771	LOC111574514	ENSAOCP00000032230	ENSAOCP00000026891	Survival of motor neuron 1, telomeric.	Peptidase M60 domain-containing protein.	0.515
LOC111570771	LOC111577153	ENSAOCP00000032230	ENSAOCP00000001623	Survival of motor neuron 1, telomeric.	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.435
LOC111570771	fam120b	ENSAOCP00000032230	ENSAOCP00000015644	Survival of motor neuron 1, telomeric.	XPG_I_2 domain-containing protein.	0.411
LOC111574506	LOC111570771	ENSAOCP00000027004	ENSAOCP00000032230	Peptidase M60 domain-containing protein.	Survival of motor neuron 1, telomeric.	0.515
LOC111574506	LOC111577153	ENSAOCP00000027004	ENSAOCP00000001623	Peptidase M60 domain-containing protein.	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.447
LOC111574514	LOC111570771	ENSAOCP00000026891	ENSAOCP00000032230	Peptidase M60 domain-containing protein.	Survival of motor neuron 1, telomeric.	0.515
LOC111574514	LOC111577153	ENSAOCP00000026891	ENSAOCP00000001623	Peptidase M60 domain-containing protein.	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.447
LOC111577153	ENSAOCP00000008854	ENSAOCP00000001623	ENSAOCP00000008854	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	TYR_PHOSPHATASE_2 domain-containing protein.	0.462
LOC111577153	LOC111570771	ENSAOCP00000001623	ENSAOCP00000032230	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Survival of motor neuron 1, telomeric.	0.435
LOC111577153	LOC111574506	ENSAOCP00000001623	ENSAOCP00000027004	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Peptidase M60 domain-containing protein.	0.447
LOC111577153	LOC111574514	ENSAOCP00000001623	ENSAOCP00000026891	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Peptidase M60 domain-containing protein.	0.447
LOC111577153	LOC111580650	ENSAOCP00000001623	ENSAOCP00000004478	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Baculoviral IAP repeat containing 2.	0.417
LOC111577153	LOC111587400	ENSAOCP00000001623	ENSAOCP00000026740	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	LIM domain kinase 1b.	0.430
LOC111577153	cunh19orf54	ENSAOCP00000001623	ENSAOCP00000002787	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Zgc:153119.	0.575
LOC111577153	exoc2	ENSAOCP00000001623	ENSAOCP00000010235	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.548
LOC111577153	fam120b	ENSAOCP00000001623	ENSAOCP00000015644	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	XPG_I_2 domain-containing protein.	0.635
LOC111577153	uspl1	ENSAOCP00000001623	ENSAOCP00000005277	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Ubiquitin specific peptidase like 1.	0.505
LOC111580650	LOC111577153	ENSAOCP00000004478	ENSAOCP00000001623	Baculoviral IAP repeat containing 2.	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.417