Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fopnlFgfr1op N-terminal like. (140 aa)    
Predicted Functional Partners:
ofd1
OFD1 centriole and centriolar satellite protein.
   
 
 0.923
ENSAOCP00000025675
LisH domain-containing protein.
   
 
 0.923
pcm1
Pericentriolar material 1.
    
 
 0.920
LOC111571426
ISY1 splicing factor homolog.
    
   0.915
gsc
Goosecoid.
    
   0.915
kiaa0753
Si:dkey-243i1.1.
    
 
 0.911
pibf1
Progesterone immunomodulatory binding factor 1.
   
 
 0.764
bmerb1
BMERB domain containing 1.
      
 0.754
ccdc138
Uncharacterized protein.
      
 0.736
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
   
  
 0.705
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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