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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fopnlFgfr1op N-terminal like. (140 aa)    
Predicted Functional Partners:
LOC111571426
ISY1 splicing factor homolog.
    
   0.919
gsc
Goosecoid.
    
   0.919
catip
Ciliogenesis associated TTC17 interacting protein.
   
    0.635
pibf1
Progesterone immunomodulatory binding factor 1.
   
 
 0.617
bmerb1
BMERB domain containing 1.
      
 0.601
tbc1d31
TBC1 domain family, member 31.
      
 0.592
kiaa0753
Si:dkey-243i1.1.
    
 
 0.590
ccdc138
Uncharacterized protein.
      
 0.586
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
   
  
 0.571
acp1
LMWPc domain-containing protein.
   
    0.569
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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