STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111588842Complement 4B (Chido blood group). (1668 aa)    
Predicted Functional Partners:
cd55
Uncharacterized protein.
   
 0.737
ENSAOCP00000024693
Uncharacterized protein.
   
 0.700
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.678
ENSAOCP00000028912
Uncharacterized protein.
   
 0.678
ENSAOCP00000028404
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.662
LOC111580649
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.653
LOC111574507
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.645
LOC111569386
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.621
Cfp
Uncharacterized protein.
   
 0.621
masp1
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
   
 0.593
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.