Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111588842Complement 4B (Chido blood group). (1668 aa)    
Predicted Functional Partners:
cd55
Uncharacterized protein.
    
 0.777
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.759
ENSAOCP00000028912
Uncharacterized protein.
   
 0.759
ENSAOCP00000024693
Uncharacterized protein.
   
 0.747
LOC111580649
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.738
LOC111574507
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.738
LOC111569386
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.731
ptx3
Pentraxin 3, long b.
    
 
 0.691
c9
Complement component 9.
   
 0.640
c5
Anaphylatoxin-like domain-containing protein.
   
 0.639
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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