Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111565017Vomeronasal type-1 receptor. (312 aa)    
Predicted Functional Partners:
LOC111574345
Olfactory receptor class A related 3.
      
 0.906
LOC111574347
Olfactory receptor class A related 4.
      
 0.904
ENSAOCP00000003583
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.617
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.617
ENSAOCP00000030196
Olfactory receptor class A related 5.
      
 0.617
sult6b1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.615
ENSAOCP00000007205
Olfactory receptor C family, r1.
      
 0.584
LOC111587247
Neuronal differentiation 4.
      
 0.553
LOC111566650
BHLH domain-containing protein.
      
 0.553
LOC111572219
Angiopoietin 2b.
      
 0.522
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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