Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001639Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
LOC111582545
CA domain-containing protein.
    
 0.559
LOC111573915
Uncharacterized protein.
    
 0.559
LOC111575536
Protocadherin-related 15a.
    
 0.559
LOC111566198
Uncharacterized protein.
    
 0.559
cib3
Calcium and integrin binding family member 3.
     
 0.512
LOC111581268
Calcium and integrin binding family member 2.
     
 0.512
CIB2
Calcium and integrin binding family member 2.
     
 0.512
LOC111584615
Synaptotagmin Vb.
   
 
 0.498
TMC1
Transmembrane channel-like protein.
   
 0.464
tmc3
Transmembrane channel-like protein.
   
 0.464
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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