STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001639Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
LOC111582545
CA domain-containing protein.
   
 0.495
LOC111573915
Uncharacterized protein.
   
 0.495
LOC111575536
Protocadherin-related 15a.
   
 0.495
LOC111566198
Uncharacterized protein.
   
 0.495
CIB2
Calcium and integrin binding family member 2.
   
 
 0.430
cib3
Calcium and integrin binding family member 3.
   
 
 0.406
LOC111581268
Calcium and integrin binding family member 2.
   
 
 0.406
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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