STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl2ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)    
Predicted Functional Partners:
arl2bp
ADP-ribosylation factor-like 2 binding protein.
   
 0.983
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
    
 0.974
tbcd
Tubulin folding cofactor D.
    
 0.964
unc119
Unc-119 lipid binding chaperone.
    
 
 0.929
LOC111580864
GMP_PDE_delta domain-containing protein.
    
 
 0.929
LOC111567724
Unc-119 lipid binding chaperone B homolog 2.
    
 
 0.782
LOC111577865
GMP_PDE_delta domain-containing protein.
    
 
 0.724
unc119b
Unc-119 homolog 1.
    
 
 0.724
tbcb
Tubulin folding cofactor B.
   
  
 0.705
tbce
Tubulin folding cofactor E.
    
 
 0.695
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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