Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001678Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
ENSAOCP00000028325
Uncharacterized protein.
 
     0.649
LOC111568669
Junctophilin-3-like.
 
     0.649
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.613
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
    
 0.584
ENSAOCP00000030355
Uncharacterized protein.
    
 0.584
LOC111563004
Uncharacterized protein.
    
 0.544
LOC111576629
Uncharacterized protein.
    
 0.544
LOC111582463
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.544
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.536
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.456
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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