STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001694Si:ch211-286o17.1. (191 aa)    
Predicted Functional Partners:
kitlg
Kit ligand a.
  
   
 0.718
LOC111569482
CD4-1 molecule.
      
 0.677
cd44
Link domain-containing protein.
      
 0.634
LOC111564110
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.610
Sell
Uncharacterized protein.
   
 
 0.603
LOC111573475
Selectin P.
   
 
 0.603
SELE
Selectin E.
   
 
 0.603
ptprc
Protein tyrosine phosphatase receptor type C.
      
 0.592
fah
Fumarylacetoacetase.
      
 0.582
cd79a
CD79a molecule, immunoglobulin-associated alpha.
      
 0.578
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.