Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001694Si:ch211-286o17.1. (191 aa)    
Predicted Functional Partners:
cd44
Link domain-containing protein.
      
 0.905
kitlg
Kit ligand a.
  
   
 0.850
ptprc
Protein tyrosine phosphatase receptor type C.
      
 0.804
LOC111564110
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.743
cd79a
CD79a molecule, immunoglobulin-associated alpha.
      
 0.739
cd8a
Ig-like domain-containing protein.
      
 0.705
LOC111569482
CD4-1 molecule.
      
 0.705
LOC111576847
Colony stimulating factor 1b (macrophage).
      
 0.696
LOC111587684
Uncharacterized protein.
      
 0.691
LOC111587679
Uncharacterized protein.
      
 0.691
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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