Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111575484Im:7138239. (296 aa)    
Predicted Functional Partners:
nfyb
Nuclear transcription factor Y, beta a.
   
 0.779
nfya
Nuclear transcription factor Y, alpha, like.
    
 0.774
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.743
LOC111575499
Anti-dorsalizing morphogenic protein.
  
   
 0.653
LOC111572058
TGF_BETA_2 domain-containing protein.
  
   
 0.570
ptpmt1
Protein tyrosine phosphatase mitochondrial 1.
      
 0.540
LOC111577240
Hairy-related 11.
      
 0.533
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.