Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aasdhAminoadipate-semialdehyde dehydrogenase. (1062 aa)    
Predicted Functional Partners:
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
 0.984
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.927
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 0.919
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 0.912
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
 
 0.897
LOC111587996
ATP-grasp domain-containing protein.
   
 
 0.897
LOC111580510
Si:dkey-10o6.2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 
 0.883
ENSAOCP00000018241
PKS_AT domain-containing protein.
  
 
 0.847
ENSAOCP00000018252
KR domain-containing protein.
  
 
 0.847
LOC111570849
Si:dkey-61p9.11.
  
 
 0.847
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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