Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cib3Calcium and integrin binding family member 3. (169 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.778
tmc3
Transmembrane channel-like protein.
    
 0.730
LOC111565732
Transmembrane channel-like protein.
    
 0.730
LOC111586201
Transmembrane channel-like protein.
    
 0.730
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.656
LOC111562643
Uncharacterized protein.
    
 0.655
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 0.639
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.614
htr5a
5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b.
     
 0.614
spice1
Spindle and centriole associated protein 1.
      
 0.613
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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