STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cib3Calcium and integrin binding family member 3. (169 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.766
tmc3
Transmembrane channel-like protein.
    
 0.742
LOC111565732
Transmembrane channel-like protein.
    
 0.742
LOC111586201
Transmembrane channel-like protein.
    
 0.742
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.659
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.659
LOC111572078
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.561
LOC111562643
Uncharacterized protein.
    
 
 0.541
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 
 0.527
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.514
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.