STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspa12aHeat shock protein 12A. (671 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.915
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.892
hspa4l
Heat shock protein 4 like.
   
 0.888
gak
Cyclin G associated kinase.
   
 0.835
hspa4
Heat shock protein 4b.
   
 0.825
akap12
A kinase (PRKA) anchor protein 12b.
    
 
 0.821
LOC111587824
Uncharacterized protein.
     
 0.810
hspa13
Heat shock protein 70 family, member 13.
     
 0.810
LOC111579555
Heat shock protein 4a.
   
 0.791
dnmbp
Dynamin binding protein.
   
 
 0.763
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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