STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577132Muscleblind-like splicing regulator 3. (359 aa)    
Predicted Functional Partners:
Dmpk
Uncharacterized protein.
      
 0.709
LOC111573325
QKI, KH domain containing, RNA binding a.
   
 
 0.627
ENSAOCP00000016695
STAR_dimer domain-containing protein.
   
 
 0.626
LOC111586881
QKI, KH domain containing, RNA binding 2.
   
 
 0.626
pabpn1
Poly(A) binding protein, nuclear 1.
   
  
 0.523
cnbp
CCHC-type zinc finger, nucleic acid binding protein a.
   
  
 0.517
ada
Adenosine deaminase.
      
 0.513
ENSAOCP00000007138
Zinc finger protein 609b.
      
 0.453
LOC111566794
Uncharacterized protein.
   
 
 0.442
LOC111580312
Cugbp, Elav-like family member 2.
   
 
 0.442
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.