STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traddTnfrsf1a-associated via death domain. (292 aa)    
Predicted Functional Partners:
fadd
Uncharacterized protein.
   
 0.999
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
0.999
LOC111586342
Uncharacterized protein.
    
 0.998
LOC111580152
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.997
LOC111576861
Tnf receptor-associated factor 2b.
    
 0.997
LOC111584314
Tnf receptor-associated factor 2b.
    
 0.997
LOC111586360
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.995
LOC111588095
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.995
LOC111588107
Caspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.992
LOC111588089
Caspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.992
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.