Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MARF1Meiosis regulator and mRNA stability factor 1. (1819 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
    
 
 0.958
dcp2
Decapping mRNA 2.
    
 
 0.800
edc4
Enhancer of mRNA decapping 4.
    
 
 0.788
bmerb1
BMERB domain containing 1.
      
 0.744
fopnl
Fgfr1op N-terminal like.
      
 0.705
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 0.683
vps45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.672
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.658
ccnb3
Cyclin B3; Belongs to the cyclin family.
   
 
 0.636
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
   
  
 0.616
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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