STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chl1Cell adhesion molecule L1-like b. (1166 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
0.700
ptprg
Carbonic anhydrase XVI b.
    
 0.591
LOC111578637
Uncharacterized protein.
    
 0.591
LOC111562656
Contactin 3b.
  
 
0.586
ENSAOCP00000001660
Uncharacterized protein.
    
0.563
cntn5
Contactin 5.
    
0.563
cntn1
Uncharacterized protein.
    
0.563
LOC111566388
Contactin 3a, tandem duplicate 1.
    
0.563
LOC111566392
Contactin 3a, tandem duplicate 2.
    
0.563
LOC111562653
Contactin 4.
    
0.563
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.