Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cd55Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
LOC111573672
Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.
   
 0.863
ENSAOCP00000004264
Adhesion G protein-coupled receptor E8; Belongs to the G-protein coupled receptor 2 family.
   
 0.863
ENSAOCP00000012394
Adhesion G protein-coupled receptor E5b, duplicate 3; Belongs to the G-protein coupled receptor 2 family.
   
 0.863
LOC111588842
Complement 4B (Chido blood group).
    
 0.777
LOC111568333
Complement component c3b, tandem duplicate 2.
    
 0.777
ENSAOCP00000014399
NTR domain-containing protein.
    
 0.777
LOC111584070
Uncharacterized protein.
    
 0.777
c3
Uncharacterized protein.
    
 0.777
LOC111584067
Uncharacterized protein.
    
 0.777
ENSAOCP00000027739
UPAR/Ly6 domain-containing protein.
     
 0.752
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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