STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap2cRAP2C, member of RAS oncogene family. (183 aa)    
Predicted Functional Partners:
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.971
LOC111580690
Uncharacterized protein.
  
0.927
LOC111587485
Uncharacterized protein.
  
0.927
LOC111573843
Uncharacterized protein.
  
0.927
LOC111580357
Ras homolog family member Ca.
  
0.927
LOC111580849
Uncharacterized protein.
  
0.927
LOC111568127
Uncharacterized protein.
  
0.926
LOC111576806
Zgc:171558.
   
 0.733
LOC111582170
Rap guanine nucleotide exchange factor (GEF) 4.
   
 0.733
LOC111581117
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.663
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.