STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582583Von Willebrand factor A domain containing 5B2. (1113 aa)    
Predicted Functional Partners:
LOC111564376
Poly (ADP-ribose) glycohydrolase a.
    
 0.672
LOC111570201
Poly (ADP-ribose) glycohydrolase, like.
    
 0.672
LOC111582226
Uncharacterized protein.
    
 0.672
faap24
FA core complex associated protein 24.
     
 0.670
xrcc5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.655
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 
 0.636
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.634
LOC111567100
Histone PARylation factor 1.
    
 
 0.628
lrwd1
Leucine-rich repeats and WD repeat domain containing 1.
      
 0.590
LOC111586491
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 
 0.589
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.