Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIF1Allograft inflammatory factor 1. (147 aa)    
Predicted Functional Partners:
tyrobp
Uncharacterized protein.
   
  
 0.954
fcer1g
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
  
 0.800
ENSAOCP00000031561
Uncharacterized protein.
   
  
 0.800
LOC111575150
Si:ch211-212k18.7.
   
 
 0.747
LOC111580399
Interleukin-1; Belongs to the IL-1 family.
   
  
 0.746
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.
   
  
 0.703
ENSAOCP00000002682
Transmembrane protein 119b.
   
  
 0.692
ptprc
Protein tyrosine phosphatase receptor type C.
   
 
 0.663
LOC111575845
Purinergic receptor P2Y12.
   
  
 0.628
il10
Interleukin 10.
   
  
 0.624
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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