Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
magi3Membrane associated guanylate kinase, WW and PDZ domain containing 3b. (1270 aa)    
Predicted Functional Partners:
ENSAOCP00000021270
PDZ domain-containing protein.
 
  
 
 0.776
gmps
Guanine monophosphate synthase.
  
 
 0.727
rhbdl3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
  
 0.649
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.625
LOC111582920
Uncharacterized protein.
   
 0.625
LOC111566303
Junction plakoglobin a.
   
 0.625
LOC111573771
Uncharacterized protein.
   
 0.624
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.623
LOC111575075
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.623
LOC111582051
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.623
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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