STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2LG-patch domain containing 2 like. (458 aa)    
Predicted Functional Partners:
ddx10
RNA helicase.
    
 0.894
ENSAOCP00000004466
G-patch domain-containing protein.
    
 
 0.889
ddx18
RNA helicase.
    
 0.884
bysl
Bystin-like.
    
 
 0.881
utp6
UTP6 small subunit processome component.
    
 
 0.876
LOC111573585
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
 0.874
DHX15
DEAH-box helicase 15.
    
 0.874
nom1
Nucleolar protein with MIF4G domain 1.
   
   0.870
utp3
UTP3 small subunit processome component.
    
   0.870
utp25
UTP25 small subunit processor component.
    
   0.870
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.