ntan1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ntan1

Uncharacterized protein. (308 aa)

Predicted Functional Partners:

rrn3

0.753

pdxdc1

0.745

chst2

0.740

LOC111564762

0.715

ENSAOCP00000019770

0.696

LOC111568879

0.692

ATE1

0.663

wdyhv1

0.640

LOC111584417

0.637

cep41

0.615

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATE1	ntan1	ENSAOCP00000009183	ENSAOCP00000001767	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	Uncharacterized protein.	0.663
ATE1	wdyhv1	ENSAOCP00000009183	ENSAOCP00000011882	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	WDYHV motif containing 1.	0.553
ENSAOCP00000019770	LOC111564762	ENSAOCP00000019770	ENSAOCP00000010271	Uncharacterized protein.	Transmembrane protein 82.	0.614
ENSAOCP00000019770	cep41	ENSAOCP00000019770	ENSAOCP00000004199	Uncharacterized protein.	Centrosomal protein 41.	0.470
ENSAOCP00000019770	ntan1	ENSAOCP00000019770	ENSAOCP00000001767	Uncharacterized protein.	Uncharacterized protein.	0.696
LOC111564762	ENSAOCP00000019770	ENSAOCP00000010271	ENSAOCP00000019770	Transmembrane protein 82.	Uncharacterized protein.	0.614
LOC111564762	LOC111584417	ENSAOCP00000010271	ENSAOCP00000006926	Transmembrane protein 82.	Syntaphilin b.	0.613
LOC111564762	cep41	ENSAOCP00000010271	ENSAOCP00000004199	Transmembrane protein 82.	Centrosomal protein 41.	0.541
LOC111564762	ntan1	ENSAOCP00000010271	ENSAOCP00000001767	Transmembrane protein 82.	Uncharacterized protein.	0.715
LOC111568879	ntan1	ENSAOCP00000008293	ENSAOCP00000001767	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Uncharacterized protein.	0.692
LOC111584417	LOC111564762	ENSAOCP00000006926	ENSAOCP00000010271	Syntaphilin b.	Transmembrane protein 82.	0.613
LOC111584417	cep41	ENSAOCP00000006926	ENSAOCP00000004199	Syntaphilin b.	Centrosomal protein 41.	0.405
LOC111584417	ntan1	ENSAOCP00000006926	ENSAOCP00000001767	Syntaphilin b.	Uncharacterized protein.	0.637
cep41	ENSAOCP00000019770	ENSAOCP00000004199	ENSAOCP00000019770	Centrosomal protein 41.	Uncharacterized protein.	0.470
cep41	LOC111564762	ENSAOCP00000004199	ENSAOCP00000010271	Centrosomal protein 41.	Transmembrane protein 82.	0.541
cep41	LOC111584417	ENSAOCP00000004199	ENSAOCP00000006926	Centrosomal protein 41.	Syntaphilin b.	0.405
cep41	ntan1	ENSAOCP00000004199	ENSAOCP00000001767	Centrosomal protein 41.	Uncharacterized protein.	0.615
chst2	ntan1	ENSAOCP00000000646	ENSAOCP00000001767	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Uncharacterized protein.	0.740
ntan1	ATE1	ENSAOCP00000001767	ENSAOCP00000009183	Uncharacterized protein.	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	0.663
ntan1	ENSAOCP00000019770	ENSAOCP00000001767	ENSAOCP00000019770	Uncharacterized protein.	Uncharacterized protein.	0.696