STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001776Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
cbr4
Carbonyl reductase 4.
   
  0.973
nudcd1
NudC domain containing 1.
    
   0.761
tcf19
Transcription factor 19 (SC1), like.
  
 0.641
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.633
LOC111562461
Uncharacterized protein.
    
 
 0.617
pfdn6
Prefoldin subunit 6.
      
 0.613
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
  
 0.601
LOC111577926
Pre-B-cell leukemia homeobox 2.
      
 0.598
qdpr
Quinoid dihydropteridine reductase a.
    
   0.538
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
   
 0.534
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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