STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001799PB1 domain-containing protein. (135 aa)    
Predicted Functional Partners:
Pard3
Par3_HAL_N_term domain-containing protein.
   
 0.931
LOC111574045
Par-3 family cell polarity regulator alpha, b.
   
 0.931
PARD3
Par-3 family cell polarity regulator.
   
 0.931
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.928
LOC111572559
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.928
CDC42
Cell division cycle 42.
    
 0.919
LOC111573839
Uncharacterized protein.
    
 0.919
llgl2
LLGL scribble cell polarity complex component 2.
    
 
 0.769
LOC111582424
LLGL scribble cell polarity complex component 1.
    
 
 0.769
ENSAOCP00000028516
Par-3 family cell polarity regulator beta b.
   
 0.750
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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