STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (143 aa)    
Predicted Functional Partners:
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
rpl6
Ribosomal protein L6.
  
 0.999
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.999
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.999
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.999
rps27a
Ribosomal protein S27a.
   
 0.999
rpl34
Ribosomal protein L34.
  
 0.999
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.999
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.