Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111586629Homeobox protein. (280 aa)    
Predicted Functional Partners:
eno4
Enolase 4.
      
 0.773
PNLIPRP2
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
    
 
 0.718
hspa12a
Heat shock protein 12A.
      
 0.699
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.645
LOC111573610
Forkhead box E3.
   
 
 0.626
gtf3c5
General transcription factor IIIC, polypeptide 5.
      
 0.617
lrtm2
Leucine-rich repeats and transmembrane domains 2a.
      
 0.612
LOC111565420
Sorting nexin 16.
      
 0.596
ripk2
Receptor-interacting serine-threonine kinase 2.
      
 0.585
bcl6
BCL6A transcription repressor a.
    
 
 0.564
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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