Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NACANascent polypeptide associated complex subunit alpha. (837 aa)    
Predicted Functional Partners:
RPS20
Ribosomal protein S20.
   
   0.994
Rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.994
btf3
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 0.993
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.993
LOC111566709
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 0.993
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
  
   0.991
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.989
RPS29
Ribosomal protein S29.
   
   0.988
rpl24
Ribosomal protein L24.
   
   0.988
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
   0.987
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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