LOC111585838 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC111585838

Uncharacterized protein. (1648 aa)

Predicted Functional Partners:

mttp

0.827

LOC111588528

0.754

LOC111574547

0.754

LOC111588527

0.754

LOC111562605

0.576

LOC111588526

0.576

LOC111585014

0.551

ENSAOCP00000012646

0.551

ENSAOCP00000016650

0.551

LOC111574951

0.551

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000012646	ENSAOCP00000016650	ENSAOCP00000012646	ENSAOCP00000016650	Uncharacterized protein.	EH domain-containing protein.	0.844
ENSAOCP00000012646	LOC111574951	ENSAOCP00000012646	ENSAOCP00000019383	Uncharacterized protein.	Uncharacterized protein.	0.844
ENSAOCP00000012646	LOC111585014	ENSAOCP00000012646	ENSAOCP00000005197	Uncharacterized protein.	Intersectin 2b.	0.844
ENSAOCP00000012646	LOC111585838	ENSAOCP00000012646	ENSAOCP00000001834	Uncharacterized protein.	Uncharacterized protein.	0.551
ENSAOCP00000016650	ENSAOCP00000012646	ENSAOCP00000016650	ENSAOCP00000012646	EH domain-containing protein.	Uncharacterized protein.	0.844
ENSAOCP00000016650	LOC111574951	ENSAOCP00000016650	ENSAOCP00000019383	EH domain-containing protein.	Uncharacterized protein.	0.844
ENSAOCP00000016650	LOC111585014	ENSAOCP00000016650	ENSAOCP00000005197	EH domain-containing protein.	Intersectin 2b.	0.844
ENSAOCP00000016650	LOC111585838	ENSAOCP00000016650	ENSAOCP00000001834	EH domain-containing protein.	Uncharacterized protein.	0.551
LOC111562605	LOC111574547	ENSAOCP00000021322	ENSAOCP00000011646	Uncharacterized protein.	Uncharacterized protein.	0.804
LOC111562605	LOC111585838	ENSAOCP00000021322	ENSAOCP00000001834	Uncharacterized protein.	Uncharacterized protein.	0.576
LOC111562605	LOC111588526	ENSAOCP00000021322	ENSAOCP00000027046	Uncharacterized protein.	Apolipoprotein Eb.	0.552
LOC111562605	LOC111588527	ENSAOCP00000021322	ENSAOCP00000027036	Uncharacterized protein.	Uncharacterized protein.	0.962
LOC111562605	LOC111588528	ENSAOCP00000021322	ENSAOCP00000011262	Uncharacterized protein.	Uncharacterized protein.	0.962
LOC111562605	mttp	ENSAOCP00000021322	ENSAOCP00000023858	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.709
LOC111574547	LOC111562605	ENSAOCP00000011646	ENSAOCP00000021322	Uncharacterized protein.	Uncharacterized protein.	0.804
LOC111574547	LOC111585838	ENSAOCP00000011646	ENSAOCP00000001834	Uncharacterized protein.	Uncharacterized protein.	0.754
LOC111574547	LOC111588526	ENSAOCP00000011646	ENSAOCP00000027046	Uncharacterized protein.	Apolipoprotein Eb.	0.811
LOC111574547	LOC111588527	ENSAOCP00000011646	ENSAOCP00000027036	Uncharacterized protein.	Uncharacterized protein.	0.624
LOC111574547	LOC111588528	ENSAOCP00000011646	ENSAOCP00000011262	Uncharacterized protein.	Uncharacterized protein.	0.624
LOC111574547	mttp	ENSAOCP00000011646	ENSAOCP00000023858	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.516