Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580075Lens intrinsic membrane protein 2.2. (174 aa)    
Predicted Functional Partners:
ENSAOCP00000001238
Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family.
      
 0.693
LOC111579047
Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family.
      
 0.548
LOC111576981
Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family.
  
   
 0.523
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
      
 0.513
Crygn
Crystallin, gamma N2; Belongs to the beta/gamma-crystallin family.
      
 0.419
ENSAOCP00000020103
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
      
 0.408
LOC111576496
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.407
LOC111567515
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.407
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
      
 0.406
LOC111581013
Solute carrier family 16 member 12b.
      
 0.401
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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