Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581301C2H2-type domain-containing protein. (317 aa)    
Predicted Functional Partners:
LOC111568416
Ethanolamine kinase 2.
    
 0.708
LOC111573967
GATA binding protein 1a.
   
 0.656
atxn1
Ataxin 1a.
   
 
 0.617
LOC111588743
AXH domain-containing protein.
   
 
 0.617
LOC111583481
5-aminolevulinate synthase.
   
  
 0.585
LOC111573674
Pre-B-cell leukemia transcription factor 4.
    
 0.585
LOC111569913
Homeobox domain-containing protein.
    
 0.585
dazap1
DAZ associated protein 1.
    
 
 0.550
LOC111586038
Erythropoietin receptor.
   
  
 0.548
LOC111572764
T-cell acute lymphocytic leukemia 1.
   
 0.528
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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