STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111568421SRY-box transcription factor 13. (589 aa)    
Predicted Functional Partners:
cep85
Centrosomal protein 85.
    
 
 0.622
trip12
Thyroid hormone receptor interactor 12.
    
 
 0.609
LOC111586389
SRY-box transcription factor 5.
    
 
0.539
LOC111587448
SRY-box transcription factor 5.
    
 
0.539
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.465
LOC111582920
Uncharacterized protein.
   
 0.465
LOC111566303
Junction plakoglobin a.
   
 0.465
LOC111573771
Uncharacterized protein.
   
 0.465
ENSAOCP00000018204
Leucine rich repeat containing 31.
      
 0.416
ENSAOCP00000002075
CTNNB1_binding domain-containing protein.
     
 0.402
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.