LOC111571973 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC111571973

Kv channel interacting protein 1 b. (330 aa)

Predicted Functional Partners:

LOC111572866

0.717

LOC111562829

0.717

KCND3

0.717

LOC111574669

0.717

LOC111563121

0.551

nkain1

0.545

scn4b

0.543

LOC111564279

0.460

ENSAOCP00000017694

0.456

cmbl

0.445

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000017694	LOC111563121	ENSAOCP00000017694	ENSAOCP00000001849	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.606
ENSAOCP00000017694	LOC111564279	ENSAOCP00000017694	ENSAOCP00000003827	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	0.603
ENSAOCP00000017694	LOC111571973	ENSAOCP00000017694	ENSAOCP00000001869	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Kv channel interacting protein 1 b.	0.456
ENSAOCP00000017694	nkain1	ENSAOCP00000017694	ENSAOCP00000000986	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Sodium/potassium transporting ATPase interacting 1.	0.605
ENSAOCP00000017694	scn4b	ENSAOCP00000017694	ENSAOCP00000022311	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Sodium channel, voltage-gated, type IV, beta a.	0.606
KCND3	LOC111571973	ENSAOCP00000023932	ENSAOCP00000001869	BTB domain-containing protein; Belongs to the potassium channel family.	Kv channel interacting protein 1 b.	0.717
LOC111562829	LOC111571973	ENSAOCP00000011306	ENSAOCP00000001869	Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.	Kv channel interacting protein 1 b.	0.717
LOC111563121	ENSAOCP00000017694	ENSAOCP00000001849	ENSAOCP00000017694	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.606
LOC111563121	LOC111564279	ENSAOCP00000001849	ENSAOCP00000003827	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	0.544
LOC111563121	LOC111571973	ENSAOCP00000001849	ENSAOCP00000001869	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Kv channel interacting protein 1 b.	0.551
LOC111563121	nkain1	ENSAOCP00000001849	ENSAOCP00000000986	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Sodium/potassium transporting ATPase interacting 1.	0.686
LOC111563121	scn4b	ENSAOCP00000001849	ENSAOCP00000022311	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Sodium channel, voltage-gated, type IV, beta a.	0.685
LOC111564279	ENSAOCP00000017694	ENSAOCP00000003827	ENSAOCP00000017694	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.603
LOC111564279	LOC111563121	ENSAOCP00000003827	ENSAOCP00000001849	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.544
LOC111564279	LOC111571973	ENSAOCP00000003827	ENSAOCP00000001869	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	Kv channel interacting protein 1 b.	0.460
LOC111564279	nkain1	ENSAOCP00000003827	ENSAOCP00000000986	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	Sodium/potassium transporting ATPase interacting 1.	0.698
LOC111564279	scn4b	ENSAOCP00000003827	ENSAOCP00000022311	Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.	Sodium channel, voltage-gated, type IV, beta a.	0.617
LOC111571973	ENSAOCP00000017694	ENSAOCP00000001869	ENSAOCP00000017694	Kv channel interacting protein 1 b.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.456
LOC111571973	KCND3	ENSAOCP00000001869	ENSAOCP00000023932	Kv channel interacting protein 1 b.	BTB domain-containing protein; Belongs to the potassium channel family.	0.717
LOC111571973	LOC111562829	ENSAOCP00000001869	ENSAOCP00000011306	Kv channel interacting protein 1 b.	Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.	0.717