Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sez6lSeizure related 6 homolog (mouse)-like. (965 aa)    
Predicted Functional Partners:
LOC111588940
Beta-secretase 2; Belongs to the peptidase A1 family.
    
 0.620
LOC111586346
Uncharacterized protein.
   
 
 0.556
ENSAOCP00000028130
Uncharacterized protein.
   
 
 0.556
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
   
  
 0.516
LOC111583509
Calcyon neuron-specific vesicular protein.
      
 0.479
ngrn
Neugrin, neurite outgrowth associated.
      
 0.477
srrd
SRR1 domain containing.
      
 0.472
mvd
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
    
 0.452
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.449
ppp4c
Serine/threonine-protein phosphatase.
    
 0.423
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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