SCG2 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SCG2

Secretogranin II. (636 aa)

Predicted Functional Partners:

chga

0.734

scg3

0.712

scg5

0.676

rln3

0.613

RLN3

0.606

LOC111587245

0.576

ENSAOCP00000031926

0.546

LOC111578213

0.542

LOC111588427

0.542

pcsk1

0.532

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000031926	LOC111587245	ENSAOCP00000031926	ENSAOCP00000030297	Uncharacterized protein.	Tachykinin 3a.	0.437
ENSAOCP00000031926	RLN3	ENSAOCP00000031926	ENSAOCP00000006599	Uncharacterized protein.	Relaxin 3a.	0.739
ENSAOCP00000031926	SCG2	ENSAOCP00000031926	ENSAOCP00000001884	Uncharacterized protein.	Secretogranin II.	0.546
ENSAOCP00000031926	rln3	ENSAOCP00000031926	ENSAOCP00000006456	Uncharacterized protein.	Relaxin 3b.	0.542
LOC111578213	SCG2	ENSAOCP00000004161	ENSAOCP00000001884	FAM20C golgi associated secretory pathway kinase a.	Secretogranin II.	0.542
LOC111578213	scg3	ENSAOCP00000004161	ENSAOCP00000024282	FAM20C golgi associated secretory pathway kinase a.	Secretogranin III.	0.602
LOC111587245	ENSAOCP00000031926	ENSAOCP00000030297	ENSAOCP00000031926	Tachykinin 3a.	Uncharacterized protein.	0.437
LOC111587245	RLN3	ENSAOCP00000030297	ENSAOCP00000006599	Tachykinin 3a.	Relaxin 3a.	0.401
LOC111587245	SCG2	ENSAOCP00000030297	ENSAOCP00000001884	Tachykinin 3a.	Secretogranin II.	0.576
LOC111587245	chga	ENSAOCP00000030297	ENSAOCP00000006406	Tachykinin 3a.	Chromogranin A.	0.411
LOC111587245	rln3	ENSAOCP00000030297	ENSAOCP00000006456	Tachykinin 3a.	Relaxin 3b.	0.401
LOC111588427	SCG2	ENSAOCP00000028777	ENSAOCP00000001884	Fam20C domain-containing protein.	Secretogranin II.	0.542
LOC111588427	scg3	ENSAOCP00000028777	ENSAOCP00000024282	Fam20C domain-containing protein.	Secretogranin III.	0.602
RLN3	ENSAOCP00000031926	ENSAOCP00000006599	ENSAOCP00000031926	Relaxin 3a.	Uncharacterized protein.	0.739
RLN3	LOC111587245	ENSAOCP00000006599	ENSAOCP00000030297	Relaxin 3a.	Tachykinin 3a.	0.401
RLN3	SCG2	ENSAOCP00000006599	ENSAOCP00000001884	Relaxin 3a.	Secretogranin II.	0.606
RLN3	rln3	ENSAOCP00000006599	ENSAOCP00000006456	Relaxin 3a.	Relaxin 3b.	0.932
SCG2	ENSAOCP00000031926	ENSAOCP00000001884	ENSAOCP00000031926	Secretogranin II.	Uncharacterized protein.	0.546
SCG2	LOC111578213	ENSAOCP00000001884	ENSAOCP00000004161	Secretogranin II.	FAM20C golgi associated secretory pathway kinase a.	0.542
SCG2	LOC111587245	ENSAOCP00000001884	ENSAOCP00000030297	Secretogranin II.	Tachykinin 3a.	0.576