Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d15TBC1 domain family, member 15. (695 aa)    
Predicted Functional Partners:
LOC111588772
RAB7a, member RAS oncogene family.
    
 0.966
LOC111566639
Uncharacterized protein.
    
 0.966
LOC111573968
Si:dkey-13a21.4.
   
 0.951
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.944
tbc1d17
TBC1 domain family, member 17.
  
  
 
0.903
optn
Optineurin.
   
 0.746
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.604
gabarap
GABA(A) receptor-associated protein b.
   
 0.604
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 
 0.557
sergef
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.552
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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