Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580073Thromboxane A2 receptor. (373 aa)    
Predicted Functional Partners:
aamp
Angio-associated, migratory cell protein.
    
 0.978
LOC111564939
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.954
LOC111567721
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.954
LOC111575629
Uncharacterized protein.
    
 0.954
LOC111575571
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.954
ptgir
Prostaglandin I2 receptor; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.918
gna12
G protein subunit alpha 12.
    
 0.889
LOC111586729
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.889
LOC111567436
Uncharacterized protein.
    
 0.889
LOC111578604
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.807
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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