STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111563123Anthrax toxin receptor; Belongs to the ATR family. (482 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.700
HDGFL3
HDGF like 3.
    
 0.513
ENSAOCP00000004571
Uncharacterized protein.
    
 0.493
ENSAOCP00000022539
RanBD1 domain-containing protein.
    
 0.493
ENSAOCP00000022560
Uncharacterized protein.
    
 0.493
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
    
 0.463
lrrc2
Uncharacterized protein.
    
 0.452
lrrc39
Leucine rich repeat containing 39.
    
 0.452
amfr
Autocrine motility factor receptor b.
      
 0.433
srrd
SRR1 domain containing.
      
 0.431
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.