Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585173NHS-like 2. (998 aa)    
Predicted Functional Partners:
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
    
   0.958
pick1
Protein interacting with prkca 1.
    
   0.958
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 
 0.883
pin4
Peptidyl-prolyl cis-trans isomerase.
      
 0.743
wasf2
WASP family member 2.
    
   0.734
ENSAOCP00000015017
WASP family member 1.
    
   0.734
shisal1
Shisa like 1b.
      
 0.730
nck2
Cytoplasmic protein.
    
   0.728
nck1
NCK adaptor protein 1b.
    
   0.728
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.707
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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