STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001905Neurogenin 3. (226 aa)    
Predicted Functional Partners:
nkx6-1
NK6 homeobox 1.
   
  
 0.596
LOC111586686
NK2 homeobox 2a.
   
 0.588
LOC111582656
NK2 homeobox 2b.
   
 0.588
onecut1
One cut domain family member.
   
 
 0.580
pdx1
Pancreatic and duodenal homeobox 1.
   
  
 0.559
LOC111575748
Glucagon b.
      
 0.555
LOC111579575
Insulinoma-associated 1b.
   
 0.550
INSM2
INSM transcriptional repressor 2.
   
 0.550
insm1
Insulinoma-associated 1a.
   
 0.550
rfx6
Regulatory factor X, 6.
   
  
 0.536
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.