STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKClock circadian regulator a. (841 aa)    
Predicted Functional Partners:
sirt1
Sirtuin 1.
    
 0.849
LOC111570255
Cryptochrome circadian regulator 3a.
   
 0.837
LOC111571340
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.817
LOC111586277
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.817
ARNTL2
Uncharacterized protein.
   
 0.817
ENSAOCP00000015250
Uncharacterized protein.
   
 0.817
bhlhe41
Basic helix-loop-helix family, member e41.
    
 0.814
per1
Period circadian clock 1b.
    
 0.783
LOC111568768
Photolyase/cryptochrome alpha/beta domain-containing protein.
   
 0.764
LOC111563354
Cryptochrome circadian regulator 1b.
   
 0.764
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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