Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
baz2aBromodomain adjacent to zinc finger domain, 2A. (2709 aa)    
Predicted Functional Partners:
LOC111581044
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.905
hells
Helicase, lymphoid specific.
   
 0.718
chd1l
Chromodomain helicase DNA binding protein 1-like.
   
 0.718
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 
 0.712
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.610
dek
DEK proto-oncogene.
   
 0.605
sf3b1
Splicing factor 3b, subunit 1.
   
 0.589
lig1
DNA ligase.
   
  
 0.563
mybbp1a
MYB binding protein (P160) 1a.
   
 0.547
nfyc
Nuclear transcription factor Y, gamma.
   
 
 0.533
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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