Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111588820Transmembrane protein 237a. (374 aa)    
Predicted Functional Partners:
tmem231
Transmembrane protein 231.
      
 0.686
nphp1
Nephronophthisis 1.
   
 
 0.614
TMEM107
Transmembrane protein 107 like.
   
 
 0.598
tmem67
Transmembrane protein 67.
   
  
 0.561
ENSAOCP00000024198
Uncharacterized protein.
   
  
 0.561
cc2d2a
Coiled-coil and C2 domain containing 2A.
   
  
 0.559
mks1
MKS transition zone complex subunit 1.
   
  
 0.558
LOC111569155
RPGRIP1 like.
     
 0.555
b9d1
B9 protein domain 1.
      
 0.543
cep290
Centrosomal protein 290.
   
 
 0.526
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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