Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571962Neuroligin 2b. (874 aa)    
Predicted Functional Partners:
LOC111567107
Uncharacterized protein.
   
 0.873
nrxn1
Uncharacterized protein.
   
 0.872
LOC111577892
Uncharacterized protein.
   
 0.872
LOC111562475
Uncharacterized protein.
   
 0.853
ENSAOCP00000022006
Uncharacterized protein.
   
 0.829
ENSAOCP00000002875
LAM_G_DOMAIN domain-containing protein.
   
 0.599
ENSAOCP00000002883
Uncharacterized protein.
   
 0.599
ENSAOCP00000003474
Neurexin 3b.
   
 0.599
wdr43
WD repeat domain 43.
   
 0.536
ENSAOCP00000024131
4.1m domain-containing protein.
   
 0.534
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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