STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpg1Uncharacterized protein. (854 aa)    
Predicted Functional Partners:
rb1cc1
RB1-inducible coiled-coil 1.
   
 0.958
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.810
sec62
SEC62 homolog, preprotein translocation factor.
   
 
 0.608
Retreg1
Reticulophagy regulator 1.
    
 
 0.585
ENSAOCP00000004571
Uncharacterized protein.
    
 0.535
ENSAOCP00000022539
RanBD1 domain-containing protein.
    
 0.535
ENSAOCP00000022560
Uncharacterized protein.
    
 0.535
retreg2
Reticulophagy regulator family member 2.
    
 
 0.525
rbbp5
Retinoblastoma binding protein 5.
    
 0.507
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.498
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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