STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helz2Uncharacterized protein. (2902 aa)    
Predicted Functional Partners:
ENSAOCP00000003984
TROVE domain-containing protein.
  
 0.955
exosc10
Exosome component 10.
   
 0.954
exosc7
Exosome component 7.
   
 0.952
exosc1
Exosome component 1.
   
 0.949
exosc9
Exosome component 9.
   
 0.946
exosc8
Exosome component 8.
   
 0.944
exosc5
Exosome component 5.
   
 0.942
exosc3
Exosome component 3.
   
 0.942
mtrex
Mtr4 exosome RNA helicase.
   
 0.936
xrn1
5'-3' exoribonuclease 1.
   
 0.885
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.