Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
helz2Uncharacterized protein. (2902 aa)    
Predicted Functional Partners:
exosc10
Exosome component 10.
   
 0.930
mtrex
Mtr4 exosome RNA helicase.
   
 0.921
exosc8
Exosome component 8.
   
 0.916
exosc5
Exosome component 5.
   
 0.912
exosc1
Exosome component 1.
   
 0.904
exosc7
Exosome component 7.
   
 0.904
exosc9
Exosome component 9.
   
 0.901
xrn1
5'-3' exoribonuclease 1.
   
 0.898
exosc3
Exosome component 3.
   
 0.894
c1d
C1D nuclear receptor corepressor.
   
 0.889
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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