RXRB protein (Amphiprion ocellaris) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

RXRB

Retinoid X receptor beta. (470 aa)

Predicted Functional Partners:

LOC111571031

0.925

LOC111572703

0.820

nr1h4

0.820

ncor2

0.804

ncor1

0.804

med1

0.789

PPARA

0.763

PPARG

0.763

ppard

0.747

nr1i2

0.739

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111571031	PPARA	ENSAOCP00000013006	ENSAOCP00000002443	Nuclear receptor subfamily 1, group H, member 3.	Peroxisome proliferator-activated receptor alpha b.	0.527
LOC111571031	PPARG	ENSAOCP00000013006	ENSAOCP00000017159	Nuclear receptor subfamily 1, group H, member 3.	Peroxisome proliferator activated receptor gamma.	0.706
LOC111571031	RXRB	ENSAOCP00000013006	ENSAOCP00000001929	Nuclear receptor subfamily 1, group H, member 3.	Retinoid X receptor beta.	0.925
LOC111571031	med1	ENSAOCP00000013006	ENSAOCP00000017723	Nuclear receptor subfamily 1, group H, member 3.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.810
LOC111571031	ncor1	ENSAOCP00000013006	ENSAOCP00000010684	Nuclear receptor subfamily 1, group H, member 3.	Nuclear receptor corepressor 1.	0.847
LOC111571031	ncor2	ENSAOCP00000013006	ENSAOCP00000006616	Nuclear receptor subfamily 1, group H, member 3.	Nuclear receptor corepressor 2.	0.847
LOC111572703	RXRB	ENSAOCP00000015763	ENSAOCP00000001929	Nuclear receptor subfamily 1, group H, member 5.	Retinoid X receptor beta.	0.820
LOC111572703	med1	ENSAOCP00000015763	ENSAOCP00000017723	Nuclear receptor subfamily 1, group H, member 5.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.812
LOC111572703	ncor1	ENSAOCP00000015763	ENSAOCP00000010684	Nuclear receptor subfamily 1, group H, member 5.	Nuclear receptor corepressor 1.	0.833
LOC111572703	ncor2	ENSAOCP00000015763	ENSAOCP00000006616	Nuclear receptor subfamily 1, group H, member 5.	Nuclear receptor corepressor 2.	0.833
PPARA	LOC111571031	ENSAOCP00000002443	ENSAOCP00000013006	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor subfamily 1, group H, member 3.	0.527
PPARA	PPARG	ENSAOCP00000002443	ENSAOCP00000017159	Peroxisome proliferator-activated receptor alpha b.	Peroxisome proliferator activated receptor gamma.	0.434
PPARA	RXRB	ENSAOCP00000002443	ENSAOCP00000001929	Peroxisome proliferator-activated receptor alpha b.	Retinoid X receptor beta.	0.763
PPARA	med1	ENSAOCP00000002443	ENSAOCP00000017723	Peroxisome proliferator-activated receptor alpha b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.922
PPARA	ncor1	ENSAOCP00000002443	ENSAOCP00000010684	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor corepressor 1.	0.794
PPARA	ncor2	ENSAOCP00000002443	ENSAOCP00000006616	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor corepressor 2.	0.794
PPARG	LOC111571031	ENSAOCP00000017159	ENSAOCP00000013006	Peroxisome proliferator activated receptor gamma.	Nuclear receptor subfamily 1, group H, member 3.	0.706
PPARG	PPARA	ENSAOCP00000017159	ENSAOCP00000002443	Peroxisome proliferator activated receptor gamma.	Peroxisome proliferator-activated receptor alpha b.	0.434
PPARG	RXRB	ENSAOCP00000017159	ENSAOCP00000001929	Peroxisome proliferator activated receptor gamma.	Retinoid X receptor beta.	0.763
PPARG	med1	ENSAOCP00000017159	ENSAOCP00000017723	Peroxisome proliferator activated receptor gamma.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.922