Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585840Synovial sarcoma, X breakpoint 2 interacting protein b. (573 aa)    
Predicted Functional Partners:
LOC111567698
Synovial sarcoma, X breakpoint 2 interacting protein a.
  
  
 
0.902
LOC111571895
Uncharacterized protein.
     
 
0.900
LOC111582786
Uncharacterized protein.
     
  0.900
actn1
Actinin, alpha 1.
     
  0.900
fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.604
trmt112
tRNA methyltransferase subunit 11-2.
   
 
 0.556
parpbp
PARP1 binding protein.
     
 0.422
exd3
Exonuclease 3'-5' domain containing 3.
    
 
 0.421
ENSAOCP00000018830
Centrosomal protein 72.
      
 0.407
adgrl4
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
      
 0.401
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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