STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbpjlRecombination signal binding protein for immunoglobulin kappa J region-like. (513 aa)    
Predicted Functional Partners:
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.912
maml2
MamL-1 domain-containing protein.
   
 0.744
ptf1a
Pancreas associated transcription factor 1a.
   
 0.728
snw1
SNW domain containing 1.
    
 0.709
ncor2
Nuclear receptor corepressor 2.
    
 0.701
ncor1
Nuclear receptor corepressor 1.
    
 0.701
LOC111573060
Four and a half LIM domains 1b.
    
 
 0.618
fhl1
Four and a half LIM domains 1a.
    
 
 0.618
LOC111578362
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.615
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.615
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.