Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nrip1Nuclear receptor interacting protein 1b. (1210 aa)    
Predicted Functional Partners:
Nr3c1
Nuclear receptor domain-containing protein.
  
 0.933
LOC111565142
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
   
 0.910
ENSAOCP00000004695
Nuclear receptor domain-containing protein.
    
 0.860
armt1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.860
LOC111586778
Uncharacterized protein.
    
 0.860
LOC111588998
Estrogen receptor 2a.
    
 0.860
THRA
Thyroid hormone receptor alpha.
   
 0.841
LOC111575976
Uncharacterized protein.
   
 0.841
thrb
Thyroid hormone receptor beta.
   
 0.841
LOC111574649
Nuclear receptor subfamily 2, group C, member 1.
    
 0.840
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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